Misaligned RGB on Structure Core & Skanect

Everytime after having scanned with Skanect and I fill the model with color, the color is off on the Z-axis (the axis point upwards). Eyes are always on the cheeks. And a t-shirt rim in the neck will have the color of the skin. How can I resolve this? Is there some configuration value in which I can tweak some ‘calibration’ data?